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Cluster: DM081_92_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_139547 k141_139547_4 7027 8346 - 2.A.66.1.13
pfam k141_139547 k141_139547_5 8353 9714 - MatE | MatE
TC k141_139547 k141_139547_6 10219 10668 - 2.A.115.2.14
peptidase k141_139547 k141_139547_7 10796 12256 - G05.UPW
pfam k141_139547 k141_139547_8 12711 13385 + Thia_YuaJ | ECF_trnsprt
CAZyme k141_139547 k141_139547_9 13452 14423 + GT2
Gene ID: k141_139547_4
Type: TC
Location: 7027 - 8346 (-)
Gene ID: k141_139547_5
Type: pfam
Location: 8353 - 9714 (-)
Gene ID: k141_139547_6
Type: TC
Location: 10219 - 10668 (-)
Gene ID: k141_139547_7
Type: peptidase
Location: 10796 - 12256 (-)
Gene ID: k141_139547_8
Type: pfam
Location: 12711 - 13385 (+)
Gene ID: k141_139547_9
Type: CAZyme
Location: 13452 - 14423 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_139547_8 vegetarian > omnivore 1.39080 0.04160
k141_139547_8 vegetarian > vegan 1.30109 0.03356

🧭 Explore Read Mapping of CGC

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