Cluster: DM062_bin.4_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: DM062_bin.4
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_213625 | k141_213625_6 | 4813 | 5151 | - | 4.A.3.1.2 |
| TF | k141_213625 | k141_213625_7 | 5366 | 6370 | - | LacI |
| TC | k141_213625 | k141_213625_8 | 6727 | 8502 | + | 4.A.3.1.1 |
| CAZyme | k141_213625 | k141_213625_9 | 8569 | 10008 | + | GH1 |
| TF | k141_213625 | k141_213625_10 | 10285 | 11322 | - | LacI |
| CAZyme | k141_213625 | k141_213625_11 | 11664 | 13106 | + | GH1 |
| TC | k141_213625 | k141_213625_12 | 13283 | 15052 | + | 4.A.3.1.1 |
Gene ID: k141_213625_6
Type: TC
Location: 4813 - 5151 (-)
Type: TC
Location: 4813 - 5151 (-)
Gene ID: k141_213625_7
Type: TF
Location: 5366 - 6370 (-)
Type: TF
Location: 5366 - 6370 (-)
Gene ID: k141_213625_8
Type: TC
Location: 6727 - 8502 (+)
Type: TC
Location: 6727 - 8502 (+)
Gene ID: k141_213625_9
Type: CAZyme
Location: 8569 - 10008 (+)
Type: CAZyme
Location: 8569 - 10008 (+)
Gene ID: k141_213625_10
Type: TF
Location: 10285 - 11322 (-)
Type: TF
Location: 10285 - 11322 (-)
Gene ID: k141_213625_11
Type: CAZyme
Location: 11664 - 13106 (+)
Type: CAZyme
Location: 11664 - 13106 (+)
Gene ID: k141_213625_12
Type: TC
Location: 13283 - 15052 (+)
Type: TC
Location: 13283 - 15052 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_213625_10 | vegetarian > omnivore | 1.12343 | 0.01276 |