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Cluster: DM056_84_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_233397 k141_233397_14 13937 14743 - 3.D.10.1.4
pfam k141_233397 k141_233397_15 14762 16138 - Lyase_1 | FumaraseC_C
pfam k141_233397 k141_233397_16 16159 17103 - Ldh_1_N | Ldh_1_C
TC k141_233397 k141_233397_17 17431 18558 + 3.B.1.1.5
NULL(UNKNOWN) k141_233397 k141_233397_18 18573 18722 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_233397 k141_233397_19 18768 20750 - 3.A.1.111.2
STP k141_233397 k141_233397_20 21081 22481 + Peptidase_M23
CAZyme k141_233397 k141_233397_21 22529 24814 + GH94
Gene ID: k141_233397_14
Type: TC
Location: 13937 - 14743 (-)
Gene ID: k141_233397_15
Type: pfam
Location: 14762 - 16138 (-)
Gene ID: k141_233397_16
Type: pfam
Location: 16159 - 17103 (-)
Gene ID: k141_233397_17
Type: TC
Location: 17431 - 18558 (+)
Gene ID: k141_233397_18
Type:
Location: 18573 - 18722 (+)
Gene ID: k141_233397_19
Type: TC
Location: 18768 - 20750 (-)
Gene ID: k141_233397_20
Type: STP
Location: 21081 - 22481 (+)
Gene ID: k141_233397_21
Type: CAZyme
Location: 22529 - 24814 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-841
→
Species
CAG-841 sp000437375

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_233397_17 vegetarian > vegan 1.11340 0.02258

🧭 Explore Read Mapping of CGC

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