Cluster: DM036_maxbin.004_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: DM036_maxbin.004
- CGC Family ID: CGCFAM_00024
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_220157 | k141_220157_71 | 78122 | 79498 | - | GH13_20 |
| TC | k141_220157 | k141_220157_72 | 79652 | 80848 | - | 2.A.1.2.18 |
| TC | k141_220157 | k141_220157_73 | 80970 | 83330 | - | 9.A.8.1.6 |
| pfam | k141_220157 | k141_220157_74 | 83791 | 84966 | + | Zn_Ribbon_1 |
| peptidase | k141_220157 | k141_220157_75 | 85390 | 86289 | - | S09.UPW |
| TC | k141_220157 | k141_220157_76 | 86536 | 87099 | + | 4.A.1.2.6 |
| TC | k141_220157 | k141_220157_77 | 87334 | 89268 | + | 9.B.97.5.1 |
Gene ID: k141_220157_71
Type: CAZyme
Location: 78122 - 79498 (-)
Type: CAZyme
Location: 78122 - 79498 (-)
Gene ID: k141_220157_72
Type: TC
Location: 79652 - 80848 (-)
Type: TC
Location: 79652 - 80848 (-)
Gene ID: k141_220157_73
Type: TC
Location: 80970 - 83330 (-)
Type: TC
Location: 80970 - 83330 (-)
Gene ID: k141_220157_74
Type: pfam
Location: 83791 - 84966 (+)
Type: pfam
Location: 83791 - 84966 (+)
Gene ID: k141_220157_75
Type: peptidase
Location: 85390 - 86289 (-)
Type: peptidase
Location: 85390 - 86289 (-)
Gene ID: k141_220157_76
Type: TC
Location: 86536 - 87099 (+)
Type: TC
Location: 86536 - 87099 (+)
Gene ID: k141_220157_77
Type: TC
Location: 87334 - 89268 (+)
Type: TC
Location: 87334 - 89268 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_220157_77 | vegan > omnivore | 1.26726 | 0.00863 |
| k141_220157_77 | vegetarian > omnivore | 1.45522 | 0.01882 |