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Cluster: DM034_36_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_66505 k141_66505_2 1723 2622 + 3.A.1.1.19
TC k141_66505 k141_66505_3 2623 3504 + 3.A.1.1.25
STP k141_66505 k141_66505_4 3550 4275 + dCache_1
TC k141_66505 k141_66505_5 4294 5337 + 8.A.59.2.1
CAZyme k141_66505 k141_66505_6 5324 7696 + GH31_3
TF k141_66505 k141_66505_7 7872 8639 + HTH_AraC | HTH_AraC
CAZyme k141_66505 k141_66505_8 8865 10775 + GH31_4
TC k141_66505 k141_66505_9 11034 12332 - 3.A.1.2.1
TC k141_66505 k141_66505_10 12345 13844 - 3.A.1.2.20
Gene ID: k141_66505_2
Type: TC
Location: 1723 - 2622 (+)
Gene ID: k141_66505_3
Type: TC
Location: 2623 - 3504 (+)
Gene ID: k141_66505_4
Type: STP
Location: 3550 - 4275 (+)
Gene ID: k141_66505_5
Type: TC
Location: 4294 - 5337 (+)
Gene ID: k141_66505_6
Type: CAZyme
Location: 5324 - 7696 (+)
Gene ID: k141_66505_7
Type: TF
Location: 7872 - 8639 (+)
Gene ID: k141_66505_8
Type: CAZyme
Location: 8865 - 10775 (+)
Gene ID: k141_66505_9
Type: TC
Location: 11034 - 12332 (-)
Gene ID: k141_66505_10
Type: TC
Location: 12345 - 13844 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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