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Cluster: DM028_bin.68_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_228443 k141_228443_7 6444 6782 - 4.A.3.1.2
TF k141_228443 k141_228443_8 6996 8000 - LacI
TC k141_228443 k141_228443_9 8357 10132 + 4.A.3.1.1
CAZyme k141_228443 k141_228443_10 10330 11769 + GH1
TF k141_228443 k141_228443_11 12101 13111 - LacI
TC k141_228443 k141_228443_12 13387 15165 + 4.A.3.1.1
CAZyme k141_228443 k141_228443_13 15242 16663 + GH1
TF k141_228443 k141_228443_14 17097 17861 - HTH_DeoR
sulfatase k141_228443 k141_228443_15 18067 19119 + S1_4
TC k141_228443 k141_228443_16 19446 19928 - 4.A.6.1.5
Gene ID: k141_228443_7
Type: TC
Location: 6444 - 6782 (-)
Gene ID: k141_228443_8
Type: TF
Location: 6996 - 8000 (-)
Gene ID: k141_228443_9
Type: TC
Location: 8357 - 10132 (+)
Gene ID: k141_228443_10
Type: CAZyme
Location: 10330 - 11769 (+)
Gene ID: k141_228443_11
Type: TF
Location: 12101 - 13111 (-)
Gene ID: k141_228443_12
Type: TC
Location: 13387 - 15165 (+)
Gene ID: k141_228443_13
Type: CAZyme
Location: 15242 - 16663 (+)
Gene ID: k141_228443_14
Type: TF
Location: 17097 - 17861 (-)
Gene ID: k141_228443_15
Type: sulfatase
Location: 18067 - 19119 (+)
Gene ID: k141_228443_16
Type: TC
Location: 19446 - 19928 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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