Cluster: DM028_bin.68_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: DM028_bin.68
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_169937 | k141_169937_3 | 2325 | 5333 | + | GH2 |
| NULL(UNKNOWN) | k141_169937 | k141_169937_4 | 5337 | 5792 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_169937 | k141_169937_5 | 5946 | 7409 | + | 2.A.3.7.4 |
| STP | k141_169937 | k141_169937_6 | 7831 | 8079 | + | PTS-HPr |
| STP | k141_169937 | k141_169937_7 | 8314 | 8556 | + | FeoA |
| TC | k141_169937 | k141_169937_8 | 8597 | 8818 | + | 9.A.8.1.6 |
| TC | k141_169937 | k141_169937_9 | 8942 | 11269 | + | 9.A.8.1.6 |
Gene ID: k141_169937_3
Type: CAZyme
Location: 2325 - 5333 (+)
Type: CAZyme
Location: 2325 - 5333 (+)
Gene ID: k141_169937_4
Type:
Location: 5337 - 5792 (+)
Type:
Location: 5337 - 5792 (+)
Gene ID: k141_169937_5
Type: TC
Location: 5946 - 7409 (+)
Type: TC
Location: 5946 - 7409 (+)
Gene ID: k141_169937_6
Type: STP
Location: 7831 - 8079 (+)
Type: STP
Location: 7831 - 8079 (+)
Gene ID: k141_169937_7
Type: STP
Location: 8314 - 8556 (+)
Type: STP
Location: 8314 - 8556 (+)
Gene ID: k141_169937_8
Type: TC
Location: 8597 - 8818 (+)
Type: TC
Location: 8597 - 8818 (+)
Gene ID: k141_169937_9
Type: TC
Location: 8942 - 11269 (+)
Type: TC
Location: 8942 - 11269 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_169937_7 | vegan > omnivore | 1.62926 | 0.00629 |