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Cluster: DM012_bin.6_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_206104 k141_206104_7 6493 6831 - 4.A.3.1.2
TF k141_206104 k141_206104_8 7046 8050 - LacI
TC k141_206104 k141_206104_9 8408 10180 + 4.A.3.1.1
CAZyme k141_206104 k141_206104_10 10247 11686 + GH1
TF k141_206104 k141_206104_11 11957 12994 - LacI
CAZyme k141_206104 k141_206104_12 13336 14778 + GH1
TC k141_206104 k141_206104_13 14955 16715 + 4.A.3.1.1
TF k141_206104 k141_206104_14 17050 18060 - LacI
TC k141_206104 k141_206104_15 18336 20114 + 4.A.3.1.1
CAZyme k141_206104 k141_206104_16 20191 21612 + GH1
Gene ID: k141_206104_7
Type: TC
Location: 6493 - 6831 (-)
Gene ID: k141_206104_8
Type: TF
Location: 7046 - 8050 (-)
Gene ID: k141_206104_9
Type: TC
Location: 8408 - 10180 (+)
Gene ID: k141_206104_10
Type: CAZyme
Location: 10247 - 11686 (+)
Gene ID: k141_206104_11
Type: TF
Location: 11957 - 12994 (-)
Gene ID: k141_206104_12
Type: CAZyme
Location: 13336 - 14778 (+)
Gene ID: k141_206104_13
Type: TC
Location: 14955 - 16715 (+)
Gene ID: k141_206104_14
Type: TF
Location: 17050 - 18060 (-)
Gene ID: k141_206104_15
Type: TC
Location: 18336 - 20114 (+)
Gene ID: k141_206104_16
Type: CAZyme
Location: 20191 - 21612 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_206104_11 vegetarian > omnivore 1.05403 0.02677

🧭 Explore Read Mapping of CGC

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