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Cluster: DM007_bin.47_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_142008 k141_142008_7 4981 6357 - GH13_20
TC k141_142008 k141_142008_8 6512 7708 - 2.A.1.2.18
NULL(UNKNOWN) k141_142008 k141_142008_9 7884 8636 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_142008 k141_142008_10 8802 10175 - GH4
TF k141_142008 k141_142008_11 10350 11102 + HTH_6
TC k141_142008 k141_142008_12 11165 12829 - 4.A.1.1.3
TC k141_142008 k141_142008_13 13144 15504 - 9.A.8.1.6
peptidase k141_142008 k141_142008_14 15689 16591 - S09.UPW
TC k141_142008 k141_142008_15 16836 17399 + 4.A.1.2.6
pfam k141_142008 k141_142008_16 17581 18984 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) k141_142008 k141_142008_17 19235 20020 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_142008 k141_142008_18 20181 21161 + 3.A.1.34.1
TC k141_142008 k141_142008_19 21366 22289 + 3.A.1.34.1
TC k141_142008 k141_142008_20 22282 23076 + 3.A.1.34.1
pfam k141_142008 k141_142008_21 23235 25262 + Metallophos | 5_nucleotid_C
TC k141_142008 k141_142008_22 25391 26158 + 1.A.23.4.2
pfam k141_142008 k141_142008_23 26252 28174 + Bmp
pfam k141_142008 k141_142008_24 28171 28881 + Metallophos | Metallophos_2
TC k141_142008 k141_142008_25 29009 29716 - 1.C.82.1.1
Gene ID: k141_142008_7
Type: CAZyme
Location: 4981 - 6357 (-)
Gene ID: k141_142008_8
Type: TC
Location: 6512 - 7708 (-)
Gene ID: k141_142008_9
Type:
Location: 7884 - 8636 (-)
Gene ID: k141_142008_10
Type: CAZyme
Location: 8802 - 10175 (-)
Gene ID: k141_142008_11
Type: TF
Location: 10350 - 11102 (+)
Gene ID: k141_142008_12
Type: TC
Location: 11165 - 12829 (-)
Gene ID: k141_142008_13
Type: TC
Location: 13144 - 15504 (-)
Gene ID: k141_142008_14
Type: peptidase
Location: 15689 - 16591 (-)
Gene ID: k141_142008_15
Type: TC
Location: 16836 - 17399 (+)
Gene ID: k141_142008_16
Type: pfam
Location: 17581 - 18984 (+)
Gene ID: k141_142008_17
Type:
Location: 19235 - 20020 (+)
Gene ID: k141_142008_18
Type: TC
Location: 20181 - 21161 (+)
Gene ID: k141_142008_19
Type: TC
Location: 21366 - 22289 (+)
Gene ID: k141_142008_20
Type: TC
Location: 22282 - 23076 (+)
Gene ID: k141_142008_21
Type: pfam
Location: 23235 - 25262 (+)
Gene ID: k141_142008_22
Type: TC
Location: 25391 - 26158 (+)
Gene ID: k141_142008_23
Type: pfam
Location: 26252 - 28174 (+)
Gene ID: k141_142008_24
Type: pfam
Location: 28171 - 28881 (+)
Gene ID: k141_142008_25
Type: TC
Location: 29009 - 29716 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_142008_9 vegan > omnivore 1.73975 0.00701
k141_142008_10 vegan > omnivore 1.48388 0.00701
k141_142008_21 vegan > omnivore 1.86617 0.00701
k141_142008_21 vegetarian > omnivore 1.41532 0.01057

🧭 Explore Read Mapping of CGC

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