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Cluster: DM007_bin.47_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_190983 k141_190983_28 32111 33280 - CE9
STP k141_190983 k141_190983_29 33399 34565 - SIS | SIS
TF k141_190983 k141_190983_30 34680 35411 - GntR
TC k141_190983 k141_190983_31 35596 36678 - 4.A.6.1.4
TC k141_190983 k141_190983_32 36668 37468 - 4.A.6.1.4
TC k141_190983 k141_190983_33 37559 38041 - 4.A.6.1.4
pfam k141_190983 k141_190983_34 38078 38359 - YajC
TC k141_190983 k141_190983_35 38359 38802 - 4.A.6.1.16
Gene ID: k141_190983_28
Type: CAZyme
Location: 32111 - 33280 (-)
Gene ID: k141_190983_29
Type: STP
Location: 33399 - 34565 (-)
Gene ID: k141_190983_30
Type: TF
Location: 34680 - 35411 (-)
Gene ID: k141_190983_31
Type: TC
Location: 35596 - 36678 (-)
Gene ID: k141_190983_32
Type: TC
Location: 36668 - 37468 (-)
Gene ID: k141_190983_33
Type: TC
Location: 37559 - 38041 (-)
Gene ID: k141_190983_34
Type: pfam
Location: 38078 - 38359 (-)
Gene ID: k141_190983_35
Type: TC
Location: 38359 - 38802 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_190983_34 vegan > omnivore 1.03030 0.00701

🧭 Explore Read Mapping of CGC

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