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Cluster: DM004_bin.80_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_98499 k141_98499_8 10660 11859 - GH43_33
pfam k141_98499 k141_98499_9 11872 13692 - SASA
CAZyme k141_98499 k141_98499_10 13804 16083 - GH43
CAZyme k141_98499 k141_98499_11 16096 17853 - GH43
CAZyme k141_98499 k141_98499_12 17850 19010 - GH43_3
TC k141_98499 k141_98499_13 19026 21113 - 3.A.1.1.27
CAZyme k141_98499 k141_98499_14 21124 22878 - GH2
TC k141_98499 k141_98499_15 22888 23832 - 3.A.1.1.36
TC k141_98499 k141_98499_16 23814 24881 - 3.A.1.1.4
Gene ID: k141_98499_8
Type: CAZyme
Location: 10660 - 11859 (-)
Gene ID: k141_98499_9
Type: pfam
Location: 11872 - 13692 (-)
Gene ID: k141_98499_10
Type: CAZyme
Location: 13804 - 16083 (-)
Gene ID: k141_98499_11
Type: CAZyme
Location: 16096 - 17853 (-)
Gene ID: k141_98499_12
Type: CAZyme
Location: 17850 - 19010 (-)
Gene ID: k141_98499_13
Type: TC
Location: 19026 - 21113 (-)
Gene ID: k141_98499_14
Type: CAZyme
Location: 21124 - 22878 (-)
Gene ID: k141_98499_15
Type: TC
Location: 22888 - 23832 (-)
Gene ID: k141_98499_16
Type: TC
Location: 23814 - 24881 (-)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-288

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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