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Cluster: DM004_bin.76_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_397002 k141_397002_12 10337 11386 - 9.B.18.2.1
pfam k141_397002 k141_397002_13 11421 12485 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | GDP_Man_Dehyd
pfam k141_397002 k141_397002_14 12488 13765 - UDPG_MGDP_dh | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC k141_397002 k141_397002_15 13788 15734 - 9.B.18.2.1
NULL(UNKNOWN) k141_397002 k141_397002_16 15946 17286 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_397002 k141_397002_17 17694 18395 - 2.A.115.2.10
peptidase k141_397002 k141_397002_18 18651 20663 + M13.017
pfam k141_397002 k141_397002_19 20663 21823 + FtsX
CAZyme k141_397002 k141_397002_20 21732 22874 - GH23
Gene ID: k141_397002_12
Type: TC
Location: 10337 - 11386 (-)
Gene ID: k141_397002_13
Type: pfam
Location: 11421 - 12485 (-)
Gene ID: k141_397002_14
Type: pfam
Location: 12488 - 13765 (-)
Gene ID: k141_397002_15
Type: TC
Location: 13788 - 15734 (-)
Gene ID: k141_397002_16
Type:
Location: 15946 - 17286 (-)
Gene ID: k141_397002_17
Type: TC
Location: 17694 - 18395 (-)
Gene ID: k141_397002_18
Type: peptidase
Location: 18651 - 20663 (+)
Gene ID: k141_397002_19
Type: pfam
Location: 20663 - 21823 (+)
Gene ID: k141_397002_20
Type: CAZyme
Location: 21732 - 22874 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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