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Cluster: DM004_bin.76_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_217295 k141_217295_2 643 1788 - 2.A.1.7.16
TF k141_217295 k141_217295_3 1778 2521 - GntR
CAZyme k141_217295 k141_217295_4 2555 3757 - GH76
CAZyme k141_217295 k141_217295_5 3769 6135 - GH92
CAZyme k141_217295 k141_217295_6 6142 7317 - GH76
CAZyme k141_217295 k141_217295_7 7317 8540 - GH76
pfam k141_217295 k141_217295_8 8606 11113 - SusE
pfam k141_217295 k141_217295_9 11110 12702 - SusD_RagB | SusD-like_2 | SusD-like_3
TC k141_217295 k141_217295_10 12846 15764 - 1.B.14.6.1
sulfatase k141_217295 k141_217295_11 15780 16889 - S1_7
NULL(UNKNOWN) k141_217295 k141_217295_12 16901 18628 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_217295 k141_217295_13 18723 22244 - 1.B.14.6.1
Gene ID: k141_217295_2
Type: TC
Location: 643 - 1788 (-)
Gene ID: k141_217295_3
Type: TF
Location: 1778 - 2521 (-)
Gene ID: k141_217295_4
Type: CAZyme
Location: 2555 - 3757 (-)
Gene ID: k141_217295_5
Type: CAZyme
Location: 3769 - 6135 (-)
Gene ID: k141_217295_6
Type: CAZyme
Location: 6142 - 7317 (-)
Gene ID: k141_217295_7
Type: CAZyme
Location: 7317 - 8540 (-)
Gene ID: k141_217295_8
Type: pfam
Location: 8606 - 11113 (-)
Gene ID: k141_217295_9
Type: pfam
Location: 11110 - 12702 (-)
Gene ID: k141_217295_10
Type: TC
Location: 12846 - 15764 (-)
Gene ID: k141_217295_11
Type: sulfatase
Location: 15780 - 16889 (-)
Gene ID: k141_217295_12
Type:
Location: 16901 - 18628 (-)
Gene ID: k141_217295_13
Type: TC
Location: 18723 - 22244 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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