Cluster: CokerMO_2019_SRR8692240_bin.20_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 6
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_3 | 1663 | 3039 | + | 3.A.1.1.27 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_4 | 3042 | 3914 | + | 3.A.1.1.27 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_5 | 3951 | 5912 | + | GH13_14 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_6 | 5917 | 7851 | + | GH133 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_7 | 7863 | 10124 | + | GT35 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_8 | 10137 | 11603 | + | GH77 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_9 | 11691 | 13448 | + | CBM34 | GH13_20 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_10 | 13523 | 15166 | + | GH13_31 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_3
Type: TC
Location: 1663 - 3039 (+)
Type: TC
Location: 1663 - 3039 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_4
Type: TC
Location: 3042 - 3914 (+)
Type: TC
Location: 3042 - 3914 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_5
Type: CAZyme
Location: 3951 - 5912 (+)
Type: CAZyme
Location: 3951 - 5912 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_6
Type: CAZyme
Location: 5917 - 7851 (+)
Type: CAZyme
Location: 5917 - 7851 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_7
Type: CAZyme
Location: 7863 - 10124 (+)
Type: CAZyme
Location: 7863 - 10124 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_8
Type: CAZyme
Location: 10137 - 11603 (+)
Type: CAZyme
Location: 10137 - 11603 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_9
Type: CAZyme
Location: 11691 - 13448 (+)
Type: CAZyme
Location: 11691 - 13448 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_10
Type: CAZyme
Location: 13523 - 15166 (+)
Type: CAZyme
Location: 13523 - 15166 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.