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Cluster: CokerMO_2019_SRR8692240_bin.20_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692240_bin.20_k141_14023 CokerMO_2019_SRR8692240_bin.20_k141_14023_2 637 1863 + 3.A.1.1.22
TC CokerMO_2019_SRR8692240_bin.20_k141_14023 CokerMO_2019_SRR8692240_bin.20_k141_14023_3 1878 3197 + 3.A.1.1.6
TC CokerMO_2019_SRR8692240_bin.20_k141_14023 CokerMO_2019_SRR8692240_bin.20_k141_14023_4 3198 4034 + 3.A.1.1.6
CAZyme CokerMO_2019_SRR8692240_bin.20_k141_14023 CokerMO_2019_SRR8692240_bin.20_k141_14023_5 4054 6831 + GH2
TF CokerMO_2019_SRR8692240_bin.20_k141_14023 CokerMO_2019_SRR8692240_bin.20_k141_14023_6 7047 7721 + Trans_reg_C
TC CokerMO_2019_SRR8692240_bin.20_k141_14023 CokerMO_2019_SRR8692240_bin.20_k141_14023_7 7809 8726 + 3.A.1.131.1
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_14023_2
Type: TC
Location: 637 - 1863 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_14023_3
Type: TC
Location: 1878 - 3197 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_14023_4
Type: TC
Location: 3198 - 4034 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_14023_5
Type: CAZyme
Location: 4054 - 6831 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_14023_6
Type: TF
Location: 7047 - 7721 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_14023_7
Type: TC
Location: 7809 - 8726 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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