Cluster: CokerMO_2019_SRR8692240_bin.20_CGC7
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_19 | 20977 | 21828 | - | 2.A.119.2.1 |
| TF | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_20 | 22058 | 22495 | + | MarR |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_21 | 22508 | 23593 | + | FUSC_2 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_22 | 23782 | 25284 | - | GH79 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_23 | 25546 | 26760 | - | GH109 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_24 | 26944 | 27579 | - | 9.B.28.1.3 |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_25 | 27846 | 28718 | - | PDDEXK_2 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_26 | 29007 | 30752 | - | GH35 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_27 | 30782 | 31981 | - | GH109 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_28 | 31985 | 33673 | - | GH110 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_29 | 33774 | 34664 | - | 3.A.1.1.9 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_30 | 34676 | 35563 | - | 3.A.1.1.9 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_31 | 35576 | 36379 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_32 | 36392 | 37210 | - | SBP_bac_1 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_12249 | CokerMO_2019_SRR8692240_bin.20_k141_12249_33 | 37452 | 39191 | + | 8.A.59.2.1 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_19
Type: TC
Location: 20977 - 21828 (-)
Type: TC
Location: 20977 - 21828 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_20
Type: TF
Location: 22058 - 22495 (+)
Type: TF
Location: 22058 - 22495 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_21
Type: pfam
Location: 22508 - 23593 (+)
Type: pfam
Location: 22508 - 23593 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_22
Type: CAZyme
Location: 23782 - 25284 (-)
Type: CAZyme
Location: 23782 - 25284 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_23
Type: CAZyme
Location: 25546 - 26760 (-)
Type: CAZyme
Location: 25546 - 26760 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_24
Type: TC
Location: 26944 - 27579 (-)
Type: TC
Location: 26944 - 27579 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_25
Type: pfam
Location: 27846 - 28718 (-)
Type: pfam
Location: 27846 - 28718 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_26
Type: CAZyme
Location: 29007 - 30752 (-)
Type: CAZyme
Location: 29007 - 30752 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_27
Type: CAZyme
Location: 30782 - 31981 (-)
Type: CAZyme
Location: 30782 - 31981 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_28
Type: CAZyme
Location: 31985 - 33673 (-)
Type: CAZyme
Location: 31985 - 33673 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_29
Type: TC
Location: 33774 - 34664 (-)
Type: TC
Location: 33774 - 34664 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_30
Type: TC
Location: 34676 - 35563 (-)
Type: TC
Location: 34676 - 35563 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_31
Type:
Location: 35576 - 36379 (-)
Type:
Location: 35576 - 36379 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_32
Type: STP
Location: 36392 - 37210 (-)
Type: STP
Location: 36392 - 37210 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_12249_33
Type: TC
Location: 37452 - 39191 (+)
Type: TC
Location: 37452 - 39191 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.