Cluster: CokerMO_2019_SRR8692240_bin.20_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.20_k141_9590 | CokerMO_2019_SRR8692240_bin.20_k141_9590_5 | 5672 | 6550 | + | 3.A.1.1.3 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_9590 | CokerMO_2019_SRR8692240_bin.20_k141_9590_6 | 6550 | 7377 | + | 3.A.1.1.39 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_9590 | CokerMO_2019_SRR8692240_bin.20_k141_9590_7 | 7469 | 8740 | + | GH177 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_9590 | CokerMO_2019_SRR8692240_bin.20_k141_9590_8 | 8760 | 10865 | + | 3.D.1.9.2 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_9590 | CokerMO_2019_SRR8692240_bin.20_k141_9590_9 | 10843 | 11286 | + | 5.A.3.3.2 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_9590_5
Type: TC
Location: 5672 - 6550 (+)
Type: TC
Location: 5672 - 6550 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_9590_6
Type: TC
Location: 6550 - 7377 (+)
Type: TC
Location: 6550 - 7377 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_9590_7
Type: CAZyme
Location: 7469 - 8740 (+)
Type: CAZyme
Location: 7469 - 8740 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_9590_8
Type: TC
Location: 8760 - 10865 (+)
Type: TC
Location: 8760 - 10865 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_9590_9
Type: TC
Location: 10843 - 11286 (+)
Type: TC
Location: 10843 - 11286 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.