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Cluster: CokerMO_2019_SRR8692240_bin.20_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692240_bin.20_k141_7603 CokerMO_2019_SRR8692240_bin.20_k141_7603_1 139 1173 + 3.A.1.5.2
TC CokerMO_2019_SRR8692240_bin.20_k141_7603 CokerMO_2019_SRR8692240_bin.20_k141_7603_2 1163 2128 + 3.A.1.5.37
CAZyme CokerMO_2019_SRR8692240_bin.20_k141_7603 CokerMO_2019_SRR8692240_bin.20_k141_7603_3 2259 6368 + GH31_18
TC CokerMO_2019_SRR8692240_bin.20_k141_7603 CokerMO_2019_SRR8692240_bin.20_k141_7603_4 6663 7976 + 5.A.1.2.1
TF CokerMO_2019_SRR8692240_bin.20_k141_7603 CokerMO_2019_SRR8692240_bin.20_k141_7603_5 8071 8523 + Rrf2
TC CokerMO_2019_SRR8692240_bin.20_k141_7603 CokerMO_2019_SRR8692240_bin.20_k141_7603_6 8561 10309 + 3.A.1.106.2
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_7603_1
Type: TC
Location: 139 - 1173 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_7603_2
Type: TC
Location: 1163 - 2128 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_7603_3
Type: CAZyme
Location: 2259 - 6368 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_7603_4
Type: TC
Location: 6663 - 7976 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_7603_5
Type: TF
Location: 8071 - 8523 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_7603_6
Type: TC
Location: 8561 - 10309 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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