Cluster: CokerMO_2019_SRR8692240_bin.20_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_40408 | CokerMO_2019_SRR8692240_bin.20_k141_40408_7 | 9560 | 11446 | + | GH129 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_40408 | CokerMO_2019_SRR8692240_bin.20_k141_40408_8 | 11489 | 12784 | + | GH177 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_40408 | CokerMO_2019_SRR8692240_bin.20_k141_40408_9 | 13210 | 14496 | + | 3.A.1.1.40 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_40408 | CokerMO_2019_SRR8692240_bin.20_k141_40408_10 | 14512 | 15432 | + | 3.A.1.1.11 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_40408 | CokerMO_2019_SRR8692240_bin.20_k141_40408_11 | 15451 | 16278 | + | 3.A.1.1.36 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_40408_7
Type: CAZyme
Location: 9560 - 11446 (+)
Type: CAZyme
Location: 9560 - 11446 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_40408_8
Type: CAZyme
Location: 11489 - 12784 (+)
Type: CAZyme
Location: 11489 - 12784 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_40408_9
Type: TC
Location: 13210 - 14496 (+)
Type: TC
Location: 13210 - 14496 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_40408_10
Type: TC
Location: 14512 - 15432 (+)
Type: TC
Location: 14512 - 15432 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_40408_11
Type: TC
Location: 15451 - 16278 (+)
Type: TC
Location: 15451 - 16278 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.