Cluster: CokerMO_2019_SRR8692240_bin.20_CGC25
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- CGC Family ID: CGCFAM_00086
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.20_k141_34707 | CokerMO_2019_SRR8692240_bin.20_k141_34707_39 | 40106 | 41935 | + | 3.A.16.1.1 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_34707 | CokerMO_2019_SRR8692240_bin.20_k141_34707_40 | 41971 | 44034 | + | CBM34 | GH13_39 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_34707 | CokerMO_2019_SRR8692240_bin.20_k141_34707_41 | 44339 | 45964 | + | 3.A.1.5.11 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_34707 | CokerMO_2019_SRR8692240_bin.20_k141_34707_42 | 46124 | 47044 | + | 3.A.1.5.11 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_34707 | CokerMO_2019_SRR8692240_bin.20_k141_34707_43 | 47065 | 47982 | + | 3.A.1.5.11 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_34707 | CokerMO_2019_SRR8692240_bin.20_k141_34707_44 | 48010 | 49005 | + | 3.A.1.5.20 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_34707 | CokerMO_2019_SRR8692240_bin.20_k141_34707_45 | 49007 | 49969 | + | 3.A.1.5.20 |
| peptidase | CokerMO_2019_SRR8692240_bin.20_k141_34707 | CokerMO_2019_SRR8692240_bin.20_k141_34707_46 | 50000 | 51496 | + | M81.UPW |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_34707 | CokerMO_2019_SRR8692240_bin.20_k141_34707_47 | 51679 | 53139 | + | 2.A.50.2.1 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_34707_39
Type: TC
Location: 40106 - 41935 (+)
Type: TC
Location: 40106 - 41935 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_34707_40
Type: CAZyme
Location: 41971 - 44034 (+)
Type: CAZyme
Location: 41971 - 44034 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_34707_41
Type: TC
Location: 44339 - 45964 (+)
Type: TC
Location: 44339 - 45964 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_34707_42
Type: TC
Location: 46124 - 47044 (+)
Type: TC
Location: 46124 - 47044 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_34707_43
Type: TC
Location: 47065 - 47982 (+)
Type: TC
Location: 47065 - 47982 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_34707_44
Type: TC
Location: 48010 - 49005 (+)
Type: TC
Location: 48010 - 49005 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_34707_45
Type: TC
Location: 49007 - 49969 (+)
Type: TC
Location: 49007 - 49969 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_34707_46
Type: peptidase
Location: 50000 - 51496 (+)
Type: peptidase
Location: 50000 - 51496 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_34707_47
Type: TC
Location: 51679 - 53139 (+)
Type: TC
Location: 51679 - 53139 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.