Cluster: CokerMO_2019_SRR8692240_bin.20_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- CGC Family ID: CGCFAM_03072
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.20_k141_32582 | CokerMO_2019_SRR8692240_bin.20_k141_32582_29 | 30783 | 31613 | - | 3.A.1.1.4 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_32582 | CokerMO_2019_SRR8692240_bin.20_k141_32582_30 | 31606 | 32502 | - | 3.A.1.1.20 |
| STP | CokerMO_2019_SRR8692240_bin.20_k141_32582 | CokerMO_2019_SRR8692240_bin.20_k141_32582_31 | 32578 | 33924 | - | SBP_bac_1 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_32582 | CokerMO_2019_SRR8692240_bin.20_k141_32582_32 | 33944 | 35071 | - | GH88 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_32582 | CokerMO_2019_SRR8692240_bin.20_k141_32582_33 | 35162 | 37117 | - | PL12_1 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_32582_29
Type: TC
Location: 30783 - 31613 (-)
Type: TC
Location: 30783 - 31613 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_32582_30
Type: TC
Location: 31606 - 32502 (-)
Type: TC
Location: 31606 - 32502 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_32582_31
Type: STP
Location: 32578 - 33924 (-)
Type: STP
Location: 32578 - 33924 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_32582_32
Type: CAZyme
Location: 33944 - 35071 (-)
Type: CAZyme
Location: 33944 - 35071 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_32582_33
Type: CAZyme
Location: 35162 - 37117 (-)
Type: CAZyme
Location: 35162 - 37117 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.