Cluster: CokerMO_2019_SRR8692240_bin.20_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- CGC Family ID: CGCFAM_00046
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_31498 | CokerMO_2019_SRR8692240_bin.20_k141_31498_17 | 15231 | 17705 | - | GT35 |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_31498 | CokerMO_2019_SRR8692240_bin.20_k141_31498_18 | 17806 | 20913 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692240_bin.20_k141_31498 | CokerMO_2019_SRR8692240_bin.20_k141_31498_19 | 21486 | 22457 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_31498 | CokerMO_2019_SRR8692240_bin.20_k141_31498_20 | 22557 | 23933 | + | 2.A.66.1.33 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_31498_17
Type: CAZyme
Location: 15231 - 17705 (-)
Type: CAZyme
Location: 15231 - 17705 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_31498_18
Type: pfam
Location: 17806 - 20913 (-)
Type: pfam
Location: 17806 - 20913 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_31498_19
Type:
Location: 21486 - 22457 (+)
Type:
Location: 21486 - 22457 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_31498_20
Type: TC
Location: 22557 - 23933 (+)
Type: TC
Location: 22557 - 23933 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.