Cluster: CokerMO_2019_SRR8692240_bin.20_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.20_k141_29651 | CokerMO_2019_SRR8692240_bin.20_k141_29651_13 | 11673 | 12605 | + | 3.A.1.1.20 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_29651 | CokerMO_2019_SRR8692240_bin.20_k141_29651_14 | 12605 | 13426 | + | 3.A.1.1.11 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_29651 | CokerMO_2019_SRR8692240_bin.20_k141_29651_15 | 13545 | 16538 | + | GH2 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_29651 | CokerMO_2019_SRR8692240_bin.20_k141_29651_16 | 16553 | 18865 | + | GH65 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_29651 | CokerMO_2019_SRR8692240_bin.20_k141_29651_17 | 18877 | 19743 | + | 2.A.7.3.52 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_29651_13
Type: TC
Location: 11673 - 12605 (+)
Type: TC
Location: 11673 - 12605 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_29651_14
Type: TC
Location: 12605 - 13426 (+)
Type: TC
Location: 12605 - 13426 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_29651_15
Type: CAZyme
Location: 13545 - 16538 (+)
Type: CAZyme
Location: 13545 - 16538 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_29651_16
Type: CAZyme
Location: 16553 - 18865 (+)
Type: CAZyme
Location: 16553 - 18865 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_29651_17
Type: TC
Location: 18877 - 19743 (+)
Type: TC
Location: 18877 - 19743 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.