Cluster: CokerMO_2019_SRR8692240_bin.20_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- CGC Family ID: CGCFAM_01563
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.20_k141_7185 | CokerMO_2019_SRR8692240_bin.20_k141_7185_8 | 9926 | 11206 | + | 3.A.1.1.40 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_7185 | CokerMO_2019_SRR8692240_bin.20_k141_7185_9 | 11218 | 12138 | + | 3.A.1.1.11 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_7185 | CokerMO_2019_SRR8692240_bin.20_k141_7185_10 | 12149 | 12976 | + | 3.A.1.1.36 |
| STP | CokerMO_2019_SRR8692240_bin.20_k141_7185 | CokerMO_2019_SRR8692240_bin.20_k141_7185_11 | 12990 | 14930 | + | TPR_2 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_7185 | CokerMO_2019_SRR8692240_bin.20_k141_7185_12 | 15020 | 16879 | + | GH129 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_7185_8
Type: TC
Location: 9926 - 11206 (+)
Type: TC
Location: 9926 - 11206 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_7185_9
Type: TC
Location: 11218 - 12138 (+)
Type: TC
Location: 11218 - 12138 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_7185_10
Type: TC
Location: 12149 - 12976 (+)
Type: TC
Location: 12149 - 12976 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_7185_11
Type: STP
Location: 12990 - 14930 (+)
Type: STP
Location: 12990 - 14930 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_7185_12
Type: CAZyme
Location: 15020 - 16879 (+)
Type: CAZyme
Location: 15020 - 16879 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.