Cluster: CokerMO_2019_SRR8692240_bin.20_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.20_k141_26572 | CokerMO_2019_SRR8692240_bin.20_k141_26572_22 | 25536 | 26825 | + | 3.A.1.1.47 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_26572 | CokerMO_2019_SRR8692240_bin.20_k141_26572_23 | 26986 | 28299 | + | 3.A.1.1.47 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_26572 | CokerMO_2019_SRR8692240_bin.20_k141_26572_24 | 28391 | 29320 | + | 3.A.1.1.47 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_26572 | CokerMO_2019_SRR8692240_bin.20_k141_26572_25 | 29317 | 30180 | + | 3.A.1.1.47 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_26572 | CokerMO_2019_SRR8692240_bin.20_k141_26572_26 | 30215 | 31552 | + | GH29 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_26572_22
Type: TC
Location: 25536 - 26825 (+)
Type: TC
Location: 25536 - 26825 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_26572_23
Type: TC
Location: 26986 - 28299 (+)
Type: TC
Location: 26986 - 28299 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_26572_24
Type: TC
Location: 28391 - 29320 (+)
Type: TC
Location: 28391 - 29320 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_26572_25
Type: TC
Location: 29317 - 30180 (+)
Type: TC
Location: 29317 - 30180 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_26572_26
Type: CAZyme
Location: 30215 - 31552 (+)
Type: CAZyme
Location: 30215 - 31552 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.