Cluster: CokerMO_2019_SRR8692240_bin.20_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- CGC Family ID: CGCFAM_00364
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.20_k141_24621 | CokerMO_2019_SRR8692240_bin.20_k141_24621_79 | 88207 | 89970 | - | 9.B.33.1.1 |
| TF | CokerMO_2019_SRR8692240_bin.20_k141_24621 | CokerMO_2019_SRR8692240_bin.20_k141_24621_80 | 89963 | 91075 | - | HTH_AraC | HTH_AraC |
| STP | CokerMO_2019_SRR8692240_bin.20_k141_24621 | CokerMO_2019_SRR8692240_bin.20_k141_24621_81 | 91097 | 91504 | - | Response_reg |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_24621 | CokerMO_2019_SRR8692240_bin.20_k141_24621_82 | 91517 | 94546 | - | GH2 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_24621 | CokerMO_2019_SRR8692240_bin.20_k141_24621_83 | 94589 | 95428 | - | 3.A.1.1.4 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_24621 | CokerMO_2019_SRR8692240_bin.20_k141_24621_84 | 95421 | 96311 | - | 3.A.1.1.4 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_24621 | CokerMO_2019_SRR8692240_bin.20_k141_24621_85 | 96439 | 97740 | - | 3.A.1.1.4 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_79
Type: TC
Location: 88207 - 89970 (-)
Type: TC
Location: 88207 - 89970 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_80
Type: TF
Location: 89963 - 91075 (-)
Type: TF
Location: 89963 - 91075 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_81
Type: STP
Location: 91097 - 91504 (-)
Type: STP
Location: 91097 - 91504 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_82
Type: CAZyme
Location: 91517 - 94546 (-)
Type: CAZyme
Location: 91517 - 94546 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_83
Type: TC
Location: 94589 - 95428 (-)
Type: TC
Location: 94589 - 95428 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_84
Type: TC
Location: 95421 - 96311 (-)
Type: TC
Location: 95421 - 96311 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_85
Type: TC
Location: 96439 - 97740 (-)
Type: TC
Location: 96439 - 97740 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.