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Cluster: CokerMO_2019_SRR8692240_bin.20_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692240_bin.20_k141_24621 CokerMO_2019_SRR8692240_bin.20_k141_24621_70 76529 77086 - 3.A.1.26.9
TC CokerMO_2019_SRR8692240_bin.20_k141_24621 CokerMO_2019_SRR8692240_bin.20_k141_24621_71 77539 78945 + 2.A.25.1.5
TF CokerMO_2019_SRR8692240_bin.20_k141_24621 CokerMO_2019_SRR8692240_bin.20_k141_24621_72 79122 79379 - HTH_3
pfam CokerMO_2019_SRR8692240_bin.20_k141_24621 CokerMO_2019_SRR8692240_bin.20_k141_24621_73 80154 80930 - PNP_UDP_1
CAZyme CokerMO_2019_SRR8692240_bin.20_k141_24621 CokerMO_2019_SRR8692240_bin.20_k141_24621_74 81047 82663 - GH2
TC CokerMO_2019_SRR8692240_bin.20_k141_24621 CokerMO_2019_SRR8692240_bin.20_k141_24621_75 82679 84112 - 2.A.2.1.1
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_70
Type: TC
Location: 76529 - 77086 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_71
Type: TC
Location: 77539 - 78945 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_72
Type: TF
Location: 79122 - 79379 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_73
Type: pfam
Location: 80154 - 80930 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_74
Type: CAZyme
Location: 81047 - 82663 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_24621_75
Type: TC
Location: 82679 - 84112 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
CokerMO_2019_SRR8692240_bin.20_k141_24621_73 vegan > omnivore 1.34433 0.02695

🧭 Explore Read Mapping of CGC

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