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Cluster: CokerMO_2019_SRR8692240_bin.20_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme CokerMO_2019_SRR8692240_bin.20_k141_17180 CokerMO_2019_SRR8692240_bin.20_k141_17180_49 51232 52890 - GH123
TC CokerMO_2019_SRR8692240_bin.20_k141_17180 CokerMO_2019_SRR8692240_bin.20_k141_17180_50 52942 53790 - 3.A.1.1.34
TC CokerMO_2019_SRR8692240_bin.20_k141_17180 CokerMO_2019_SRR8692240_bin.20_k141_17180_51 53792 54670 - 3.A.1.1.7
STP CokerMO_2019_SRR8692240_bin.20_k141_17180 CokerMO_2019_SRR8692240_bin.20_k141_17180_52 54786 56045 - SBP_bac_1
NULL(UNKNOWN) CokerMO_2019_SRR8692240_bin.20_k141_17180 CokerMO_2019_SRR8692240_bin.20_k141_17180_53 56310 56417 + NULL(UNKNOWN)
[View Structural Homologs]
TC CokerMO_2019_SRR8692240_bin.20_k141_17180 CokerMO_2019_SRR8692240_bin.20_k141_17180_54 56522 56893 - 9.B.55.2.1
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_49
Type: CAZyme
Location: 51232 - 52890 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_50
Type: TC
Location: 52942 - 53790 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_51
Type: TC
Location: 53792 - 54670 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_52
Type: STP
Location: 54786 - 56045 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_53
Type:
Location: 56310 - 56417 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_54
Type: TC
Location: 56522 - 56893 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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