Cluster: CokerMO_2019_SRR8692240_bin.20_CGC12
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- CGC Family ID: CGCFAM_04419
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_17180 | CokerMO_2019_SRR8692240_bin.20_k141_17180_5 | 4499 | 6379 | + | GH20 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_17180 | CokerMO_2019_SRR8692240_bin.20_k141_17180_6 | 6427 | 7701 | + | GH177 |
| TF | CokerMO_2019_SRR8692240_bin.20_k141_17180 | CokerMO_2019_SRR8692240_bin.20_k141_17180_7 | 7749 | 8645 | - | HTH_AraC | HTH_AraC |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_17180 | CokerMO_2019_SRR8692240_bin.20_k141_17180_8 | 8649 | 9527 | - | 3.A.1.1.18 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_17180 | CokerMO_2019_SRR8692240_bin.20_k141_17180_9 | 9540 | 10460 | - | 3.A.1.1.25 |
| STP | CokerMO_2019_SRR8692240_bin.20_k141_17180 | CokerMO_2019_SRR8692240_bin.20_k141_17180_10 | 10565 | 11890 | - | SBP_bac_1 |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_17180 | CokerMO_2019_SRR8692240_bin.20_k141_17180_11 | 12282 | 13970 | - | PEPCK_ATP |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_17180 | CokerMO_2019_SRR8692240_bin.20_k141_17180_12 | 14226 | 15170 | - | GT4 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_17180 | CokerMO_2019_SRR8692240_bin.20_k141_17180_13 | 15145 | 16398 | - | GT4 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_5
Type: CAZyme
Location: 4499 - 6379 (+)
Type: CAZyme
Location: 4499 - 6379 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_6
Type: CAZyme
Location: 6427 - 7701 (+)
Type: CAZyme
Location: 6427 - 7701 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_7
Type: TF
Location: 7749 - 8645 (-)
Type: TF
Location: 7749 - 8645 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_8
Type: TC
Location: 8649 - 9527 (-)
Type: TC
Location: 8649 - 9527 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_9
Type: TC
Location: 9540 - 10460 (-)
Type: TC
Location: 9540 - 10460 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_10
Type: STP
Location: 10565 - 11890 (-)
Type: STP
Location: 10565 - 11890 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_11
Type: pfam
Location: 12282 - 13970 (-)
Type: pfam
Location: 12282 - 13970 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_12
Type: CAZyme
Location: 14226 - 15170 (-)
Type: CAZyme
Location: 14226 - 15170 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_17180_13
Type: CAZyme
Location: 15145 - 16398 (-)
Type: CAZyme
Location: 15145 - 16398 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.