Cluster: CokerMO_2019_SRR8692240_bin.20_CGC11
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.20
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_62 | 67107 | 67793 | + | 9.B.27.1.1 |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_63 | 67783 | 68760 | + | CCG | CCG | Fer4_7 | Fer4_8 | Fer4_17 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_64 | 68765 | 69463 | + | 9.B.27.1.2 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_65 | 69469 | 70806 | + | GT2 |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_66 | 70817 | 71860 | + | APH |
| STP | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_67 | 71996 | 72814 | + | Rhodanese | Rhodanese |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_68 | 72887 | 74140 | + | 3.A.1.19.4 |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_69 | 74151 | 75008 | + | BPD_transp_1 |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_70 | 75012 | 75827 | + | BPD_transp_1 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_71 | 75840 | 76682 | + | 3.A.1.11.8 |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_72 | 76675 | 77556 | + | IU_nuc_hydro |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_73 | 77710 | 78228 | + | Pro_isomerase |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_74 | 78368 | 79219 | + | 3.A.1.26.7 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_75 | 79204 | 80076 | + | 3.A.1.26.7 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_76 | 80095 | 80919 | + | 3.A.1.25.4 |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_77 | 80930 | 81679 | + | PseudoU_synth_1 | PseudoU_synth_1 |
| pfam | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_78 | 81759 | 82790 | + | DUF6033 |
| TC | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_79 | 82842 | 85034 | + | 3.A.7.7.1 |
| CAZyme | CokerMO_2019_SRR8692240_bin.20_k141_15150 | CokerMO_2019_SRR8692240_bin.20_k141_15150_80 | 85124 | 86281 | + | CE9 |
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_62
Type: TC
Location: 67107 - 67793 (+)
Type: TC
Location: 67107 - 67793 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_63
Type: pfam
Location: 67783 - 68760 (+)
Type: pfam
Location: 67783 - 68760 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_64
Type: TC
Location: 68765 - 69463 (+)
Type: TC
Location: 68765 - 69463 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_65
Type: CAZyme
Location: 69469 - 70806 (+)
Type: CAZyme
Location: 69469 - 70806 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_66
Type: pfam
Location: 70817 - 71860 (+)
Type: pfam
Location: 70817 - 71860 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_67
Type: STP
Location: 71996 - 72814 (+)
Type: STP
Location: 71996 - 72814 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_68
Type: TC
Location: 72887 - 74140 (+)
Type: TC
Location: 72887 - 74140 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_69
Type: pfam
Location: 74151 - 75008 (+)
Type: pfam
Location: 74151 - 75008 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_70
Type: pfam
Location: 75012 - 75827 (+)
Type: pfam
Location: 75012 - 75827 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_71
Type: TC
Location: 75840 - 76682 (+)
Type: TC
Location: 75840 - 76682 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_72
Type: pfam
Location: 76675 - 77556 (+)
Type: pfam
Location: 76675 - 77556 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_73
Type: pfam
Location: 77710 - 78228 (+)
Type: pfam
Location: 77710 - 78228 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_74
Type: TC
Location: 78368 - 79219 (+)
Type: TC
Location: 78368 - 79219 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_75
Type: TC
Location: 79204 - 80076 (+)
Type: TC
Location: 79204 - 80076 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_76
Type: TC
Location: 80095 - 80919 (+)
Type: TC
Location: 80095 - 80919 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_77
Type: pfam
Location: 80930 - 81679 (+)
Type: pfam
Location: 80930 - 81679 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_78
Type: pfam
Location: 81759 - 82790 (+)
Type: pfam
Location: 81759 - 82790 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_79
Type: TC
Location: 82842 - 85034 (+)
Type: TC
Location: 82842 - 85034 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.20_k141_15150_80
Type: CAZyme
Location: 85124 - 86281 (+)
Type: CAZyme
Location: 85124 - 86281 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900546325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.