Cluster: CokerMO_2019_SRR8692240_bin.19_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.19
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.19_k141_14777 | CokerMO_2019_SRR8692240_bin.19_k141_14777_45 | 47826 | 48527 | + | 3.A.1.122.7 |
| pfam | CokerMO_2019_SRR8692240_bin.19_k141_14777 | CokerMO_2019_SRR8692240_bin.19_k141_14777_46 | 48537 | 51914 | + | FtsX | FtsX |
| CAZyme | CokerMO_2019_SRR8692240_bin.19_k141_14777 | CokerMO_2019_SRR8692240_bin.19_k141_14777_47 | 51930 | 53246 | + | GH13_20 |
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_14777_45
Type: TC
Location: 47826 - 48527 (+)
Type: TC
Location: 47826 - 48527 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_14777_46
Type: pfam
Location: 48537 - 51914 (+)
Type: pfam
Location: 48537 - 51914 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_14777_47
Type: CAZyme
Location: 51930 - 53246 (+)
Type: CAZyme
Location: 51930 - 53246 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp900756035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| CokerMO_2019_SRR8692240_bin.19_k141_14777_47 | vegan > omnivore | 1.73950 | 0.00574 |
| CokerMO_2019_SRR8692240_bin.19_k141_14777_47 | vegetarian > omnivore | 1.28650 | 0.02017 |