Cluster: CokerMO_2019_SRR8692240_bin.19_CGC31
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.19
- CGC Family ID: CGCFAM_05859
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692240_bin.19_k141_42419 | CokerMO_2019_SRR8692240_bin.19_k141_42419_42 | 45186 | 46259 | - | GT28 |
| pfam | CokerMO_2019_SRR8692240_bin.19_k141_42419 | CokerMO_2019_SRR8692240_bin.19_k141_42419_43 | 46275 | 46520 | - | TSCPD |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_42419 | CokerMO_2019_SRR8692240_bin.19_k141_42419_44 | 46766 | 47197 | + | 4.A.2.1.2 |
| TF | CokerMO_2019_SRR8692240_bin.19_k141_42419 | CokerMO_2019_SRR8692240_bin.19_k141_42419_45 | 47430 | 47879 | + | MarR |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_42419 | CokerMO_2019_SRR8692240_bin.19_k141_42419_46 | 47872 | 49230 | + | 2.A.66.1.32 |
| pfam | CokerMO_2019_SRR8692240_bin.19_k141_42419 | CokerMO_2019_SRR8692240_bin.19_k141_42419_47 | 49341 | 50033 | + | PNP_UDP_1 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692240_bin.19_k141_42419 | CokerMO_2019_SRR8692240_bin.19_k141_42419_48 | 50120 | 50809 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | CokerMO_2019_SRR8692240_bin.19_k141_42419 | CokerMO_2019_SRR8692240_bin.19_k141_42419_49 | 50854 | 51693 | + | CE4 |
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_42419_42
Type: CAZyme
Location: 45186 - 46259 (-)
Type: CAZyme
Location: 45186 - 46259 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_42419_43
Type: pfam
Location: 46275 - 46520 (-)
Type: pfam
Location: 46275 - 46520 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_42419_44
Type: TC
Location: 46766 - 47197 (+)
Type: TC
Location: 46766 - 47197 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_42419_45
Type: TF
Location: 47430 - 47879 (+)
Type: TF
Location: 47430 - 47879 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_42419_46
Type: TC
Location: 47872 - 49230 (+)
Type: TC
Location: 47872 - 49230 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_42419_47
Type: pfam
Location: 49341 - 50033 (+)
Type: pfam
Location: 49341 - 50033 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_42419_48
Type:
Location: 50120 - 50809 (+)
Type:
Location: 50120 - 50809 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_42419_49
Type: CAZyme
Location: 50854 - 51693 (+)
Type: CAZyme
Location: 50854 - 51693 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp900756035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.