Cluster: CokerMO_2019_SRR8692240_bin.19_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.19
- CGC Family ID: CGCFAM_00549
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692240_bin.19_k141_41059 | CokerMO_2019_SRR8692240_bin.19_k141_41059_164 | 172084 | 175524 | + | GT2 |
| pfam | CokerMO_2019_SRR8692240_bin.19_k141_41059 | CokerMO_2019_SRR8692240_bin.19_k141_41059_165 | 175526 | 179179 | + | Glyphos_transf | Glyphos_transf |
| pfam | CokerMO_2019_SRR8692240_bin.19_k141_41059 | CokerMO_2019_SRR8692240_bin.19_k141_41059_166 | 179207 | 180262 | + | Acyl_transf_3 |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_41059 | CokerMO_2019_SRR8692240_bin.19_k141_41059_167 | 180382 | 181158 | + | 3.A.1.103.1 |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_41059 | CokerMO_2019_SRR8692240_bin.19_k141_41059_168 | 181168 | 181908 | + | 3.A.1.103.5 |
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_41059_164
Type: CAZyme
Location: 172084 - 175524 (+)
Type: CAZyme
Location: 172084 - 175524 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_41059_165
Type: pfam
Location: 175526 - 179179 (+)
Type: pfam
Location: 175526 - 179179 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_41059_166
Type: pfam
Location: 179207 - 180262 (+)
Type: pfam
Location: 179207 - 180262 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_41059_167
Type: TC
Location: 180382 - 181158 (+)
Type: TC
Location: 180382 - 181158 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_41059_168
Type: TC
Location: 181168 - 181908 (+)
Type: TC
Location: 181168 - 181908 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp900756035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| CokerMO_2019_SRR8692240_bin.19_k141_41059_167 | vegan > omnivore | 1.96325 | 0.00574 |
| CokerMO_2019_SRR8692240_bin.19_k141_41059_168 | vegan > omnivore | 1.56388 | 0.00574 |