Cluster: CokerMO_2019_SRR8692240_bin.19_CGC24
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.19
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.19_k141_35909 | CokerMO_2019_SRR8692240_bin.19_k141_35909_15 | 13023 | 15701 | + | 3.A.23.1.1 |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_35909 | CokerMO_2019_SRR8692240_bin.19_k141_35909_16 | 15939 | 16331 | + | 4.A.6.2.2 |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_35909 | CokerMO_2019_SRR8692240_bin.19_k141_35909_17 | 16344 | 16823 | + | 4.A.6.1.17 |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_35909 | CokerMO_2019_SRR8692240_bin.19_k141_35909_18 | 16839 | 17597 | + | 4.A.6.1.17 |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_35909 | CokerMO_2019_SRR8692240_bin.19_k141_35909_19 | 17594 | 18418 | + | 4.A.6.1.17 |
| CAZyme | CokerMO_2019_SRR8692240_bin.19_k141_35909 | CokerMO_2019_SRR8692240_bin.19_k141_35909_20 | 18435 | 19196 | + | CE1 |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_35909 | CokerMO_2019_SRR8692240_bin.19_k141_35909_21 | 19198 | 20097 | + | 2.A.7.3.12 |
| pfam | CokerMO_2019_SRR8692240_bin.19_k141_35909 | CokerMO_2019_SRR8692240_bin.19_k141_35909_22 | 20281 | 20847 | + | Adenine_glyco |
| STP | CokerMO_2019_SRR8692240_bin.19_k141_35909 | CokerMO_2019_SRR8692240_bin.19_k141_35909_23 | 20854 | 23028 | + | HATPase_c | HisKA | Response_reg |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_35909 | CokerMO_2019_SRR8692240_bin.19_k141_35909_24 | 23048 | 23863 | - | 3.A.1.121.4 |
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_35909_15
Type: TC
Location: 13023 - 15701 (+)
Type: TC
Location: 13023 - 15701 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_35909_16
Type: TC
Location: 15939 - 16331 (+)
Type: TC
Location: 15939 - 16331 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_35909_17
Type: TC
Location: 16344 - 16823 (+)
Type: TC
Location: 16344 - 16823 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_35909_18
Type: TC
Location: 16839 - 17597 (+)
Type: TC
Location: 16839 - 17597 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_35909_19
Type: TC
Location: 17594 - 18418 (+)
Type: TC
Location: 17594 - 18418 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_35909_20
Type: CAZyme
Location: 18435 - 19196 (+)
Type: CAZyme
Location: 18435 - 19196 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_35909_21
Type: TC
Location: 19198 - 20097 (+)
Type: TC
Location: 19198 - 20097 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_35909_22
Type: pfam
Location: 20281 - 20847 (+)
Type: pfam
Location: 20281 - 20847 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_35909_23
Type: STP
Location: 20854 - 23028 (+)
Type: STP
Location: 20854 - 23028 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_35909_24
Type: TC
Location: 23048 - 23863 (-)
Type: TC
Location: 23048 - 23863 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp900756035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.