Cluster: CokerMO_2019_SRR8692240_bin.19_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.19
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.19_k141_33009 | CokerMO_2019_SRR8692240_bin.19_k141_33009_4 | 5518 | 6450 | + | 3.A.5.1.1 |
| STP | CokerMO_2019_SRR8692240_bin.19_k141_33009 | CokerMO_2019_SRR8692240_bin.19_k141_33009_5 | 6454 | 7671 | + | ACT | PALP |
| CAZyme | CokerMO_2019_SRR8692240_bin.19_k141_33009 | CokerMO_2019_SRR8692240_bin.19_k141_33009_6 | 8056 | 10470 | + | CBM48 | GH13_9 |
| pfam | CokerMO_2019_SRR8692240_bin.19_k141_33009 | CokerMO_2019_SRR8692240_bin.19_k141_33009_7 | 10485 | 11669 | + | NTP_transferase | Hexapep_GlmU |
| pfam | CokerMO_2019_SRR8692240_bin.19_k141_33009 | CokerMO_2019_SRR8692240_bin.19_k141_33009_8 | 11682 | 12815 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | CokerMO_2019_SRR8692240_bin.19_k141_33009 | CokerMO_2019_SRR8692240_bin.19_k141_33009_9 | 12808 | 14253 | + | GT5 |
| CAZyme | CokerMO_2019_SRR8692240_bin.19_k141_33009 | CokerMO_2019_SRR8692240_bin.19_k141_33009_10 | 14477 | 16936 | + | GT35 |
| CAZyme | CokerMO_2019_SRR8692240_bin.19_k141_33009 | CokerMO_2019_SRR8692240_bin.19_k141_33009_11 | 16958 | 18880 | + | GH13_39 |
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_33009_4
Type: TC
Location: 5518 - 6450 (+)
Type: TC
Location: 5518 - 6450 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_33009_5
Type: STP
Location: 6454 - 7671 (+)
Type: STP
Location: 6454 - 7671 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_33009_6
Type: CAZyme
Location: 8056 - 10470 (+)
Type: CAZyme
Location: 8056 - 10470 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_33009_7
Type: pfam
Location: 10485 - 11669 (+)
Type: pfam
Location: 10485 - 11669 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_33009_8
Type: pfam
Location: 11682 - 12815 (+)
Type: pfam
Location: 11682 - 12815 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_33009_9
Type: CAZyme
Location: 12808 - 14253 (+)
Type: CAZyme
Location: 12808 - 14253 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_33009_10
Type: CAZyme
Location: 14477 - 16936 (+)
Type: CAZyme
Location: 14477 - 16936 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_33009_11
Type: CAZyme
Location: 16958 - 18880 (+)
Type: CAZyme
Location: 16958 - 18880 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp900756035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| CokerMO_2019_SRR8692240_bin.19_k141_33009_8 | vegan > omnivore | 1.62408 | 0.00574 |