Cluster: CokerMO_2019_SRR8692240_bin.19_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.19
- CGC Family ID: CGCFAM_03228
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.19_k141_31689 | CokerMO_2019_SRR8692240_bin.19_k141_31689_69 | 71347 | 71706 | + | 1.E.14.1.15 |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_31689 | CokerMO_2019_SRR8692240_bin.19_k141_31689_70 | 71699 | 72391 | + | 2.A.122.1.4 |
| pfam | CokerMO_2019_SRR8692240_bin.19_k141_31689 | CokerMO_2019_SRR8692240_bin.19_k141_31689_71 | 72417 | 73007 | + | Cytidylate_kin2 |
| CAZyme | CokerMO_2019_SRR8692240_bin.19_k141_31689 | CokerMO_2019_SRR8692240_bin.19_k141_31689_72 | 73074 | 74090 | - | GT2 |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_31689 | CokerMO_2019_SRR8692240_bin.19_k141_31689_73 | 74135 | 76033 | - | 3.A.1.120.6 |
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_31689_69
Type: TC
Location: 71347 - 71706 (+)
Type: TC
Location: 71347 - 71706 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_31689_70
Type: TC
Location: 71699 - 72391 (+)
Type: TC
Location: 71699 - 72391 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_31689_71
Type: pfam
Location: 72417 - 73007 (+)
Type: pfam
Location: 72417 - 73007 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_31689_72
Type: CAZyme
Location: 73074 - 74090 (-)
Type: CAZyme
Location: 73074 - 74090 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_31689_73
Type: TC
Location: 74135 - 76033 (-)
Type: TC
Location: 74135 - 76033 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp900756035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| CokerMO_2019_SRR8692240_bin.19_k141_31689_72 | vegan > omnivore | 1.35384 | 0.00574 |
| CokerMO_2019_SRR8692240_bin.19_k141_31689_73 | vegan > omnivore | 3.24061 | 0.00574 |