Cluster: CokerMO_2019_SRR8692240_bin.19_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692240_bin.19
- CGC Family ID: CGCFAM_00707
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692240_bin.19_k141_22437 | CokerMO_2019_SRR8692240_bin.19_k141_22437_25 | 21784 | 22539 | + | 9.B.158.1.1 |
| CAZyme | CokerMO_2019_SRR8692240_bin.19_k141_22437 | CokerMO_2019_SRR8692240_bin.19_k141_22437_26 | 22649 | 23611 | + | GT2 |
| pfam | CokerMO_2019_SRR8692240_bin.19_k141_22437 | CokerMO_2019_SRR8692240_bin.19_k141_22437_27 | 23613 | 26294 | + | YfhO |
| TF | CokerMO_2019_SRR8692240_bin.19_k141_22437 | CokerMO_2019_SRR8692240_bin.19_k141_22437_28 | 26287 | 26727 | - | Rrf2 |
| TC | CokerMO_2019_SRR8692240_bin.19_k141_22437 | CokerMO_2019_SRR8692240_bin.19_k141_22437_29 | 26940 | 29834 | + | 9.B.74.1.3 |
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_22437_25
Type: TC
Location: 21784 - 22539 (+)
Type: TC
Location: 21784 - 22539 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_22437_26
Type: CAZyme
Location: 22649 - 23611 (+)
Type: CAZyme
Location: 22649 - 23611 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_22437_27
Type: pfam
Location: 23613 - 26294 (+)
Type: pfam
Location: 23613 - 26294 (+)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_22437_28
Type: TF
Location: 26287 - 26727 (-)
Type: TF
Location: 26287 - 26727 (-)
Gene ID: CokerMO_2019_SRR8692240_bin.19_k141_22437_29
Type: TC
Location: 26940 - 29834 (+)
Type: TC
Location: 26940 - 29834 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp900756035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.