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Cluster: CokerMO_2019_SRR8692236_bin.2_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692236_bin.2_k141_13053 CokerMO_2019_SRR8692236_bin.2_k141_13053_37 42913 44142 + 2.A.1.2.25
CAZyme CokerMO_2019_SRR8692236_bin.2_k141_13053 CokerMO_2019_SRR8692236_bin.2_k141_13053_38 44386 45711 + GH4
TC CokerMO_2019_SRR8692236_bin.2_k141_13053 CokerMO_2019_SRR8692236_bin.2_k141_13053_39 45736 47316 + 4.A.1.1.14
TF CokerMO_2019_SRR8692236_bin.2_k141_13053 CokerMO_2019_SRR8692236_bin.2_k141_13053_40 47395 48195 + HTH_6
TC CokerMO_2019_SRR8692236_bin.2_k141_13053 CokerMO_2019_SRR8692236_bin.2_k141_13053_41 48388 49950 - 4.A.1.1.3
CAZyme CokerMO_2019_SRR8692236_bin.2_k141_13053 CokerMO_2019_SRR8692236_bin.2_k141_13053_42 50033 51358 - GH4
Gene ID: CokerMO_2019_SRR8692236_bin.2_k141_13053_37
Type: TC
Location: 42913 - 44142 (+)
Gene ID: CokerMO_2019_SRR8692236_bin.2_k141_13053_38
Type: CAZyme
Location: 44386 - 45711 (+)
Gene ID: CokerMO_2019_SRR8692236_bin.2_k141_13053_39
Type: TC
Location: 45736 - 47316 (+)
Gene ID: CokerMO_2019_SRR8692236_bin.2_k141_13053_40
Type: TF
Location: 47395 - 48195 (+)
Gene ID: CokerMO_2019_SRR8692236_bin.2_k141_13053_41
Type: TC
Location: 48388 - 49950 (-)
Gene ID: CokerMO_2019_SRR8692236_bin.2_k141_13053_42
Type: CAZyme
Location: 50033 - 51358 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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