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Cluster: CokerMO_2019_SRR8692231_bin.5_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme CokerMO_2019_SRR8692231_bin.5_k141_9207 CokerMO_2019_SRR8692231_bin.5_k141_9207_108 117601 118557 - GT2
pfam CokerMO_2019_SRR8692231_bin.5_k141_9207 CokerMO_2019_SRR8692231_bin.5_k141_9207_109 118588 120129 - LytR_cpsA_psr
TC CokerMO_2019_SRR8692231_bin.5_k141_9207 CokerMO_2019_SRR8692231_bin.5_k141_9207_110 120142 121545 - 9.B.18.1.1
CAZyme CokerMO_2019_SRR8692231_bin.5_k141_9207 CokerMO_2019_SRR8692231_bin.5_k141_9207_111 121638 122585 - GT2
CAZyme CokerMO_2019_SRR8692231_bin.5_k141_9207 CokerMO_2019_SRR8692231_bin.5_k141_9207_112 122589 124448 - GT2 | GT2
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_9207_108
Type: CAZyme
Location: 117601 - 118557 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_9207_109
Type: pfam
Location: 118588 - 120129 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_9207_110
Type: TC
Location: 120142 - 121545 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_9207_111
Type: CAZyme
Location: 121638 - 122585 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_9207_112
Type: CAZyme
Location: 122589 - 124448 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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