Cluster: CokerMO_2019_SRR8692231_bin.5_CGC45
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.5
- CGC Family ID: CGCFAM_01669
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.5_k141_65879 | CokerMO_2019_SRR8692231_bin.5_k141_65879_29 | 26178 | 27011 | - | 3.A.1.1.28 |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_65879 | CokerMO_2019_SRR8692231_bin.5_k141_65879_30 | 27011 | 27865 | - | 3.A.1.1.20 |
| STP | CokerMO_2019_SRR8692231_bin.5_k141_65879 | CokerMO_2019_SRR8692231_bin.5_k141_65879_31 | 27894 | 29162 | - | SBP_bac_1 |
| TF | CokerMO_2019_SRR8692231_bin.5_k141_65879 | CokerMO_2019_SRR8692231_bin.5_k141_65879_32 | 29244 | 30803 | - | HTH_AraC | HTH_AraC |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_65879 | CokerMO_2019_SRR8692231_bin.5_k141_65879_33 | 30793 | 32562 | - | 8.A.59.2.1 |
| TF | CokerMO_2019_SRR8692231_bin.5_k141_65879 | CokerMO_2019_SRR8692231_bin.5_k141_65879_34 | 32546 | 33415 | - | HTH_AraC | HTH_AraC |
| pfam | CokerMO_2019_SRR8692231_bin.5_k141_65879 | CokerMO_2019_SRR8692231_bin.5_k141_65879_35 | 33589 | 34650 | + | URO-D |
| CAZyme | CokerMO_2019_SRR8692231_bin.5_k141_65879 | CokerMO_2019_SRR8692231_bin.5_k141_65879_36 | 34707 | 35726 | - | GH29 |
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65879_29
Type: TC
Location: 26178 - 27011 (-)
Type: TC
Location: 26178 - 27011 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65879_30
Type: TC
Location: 27011 - 27865 (-)
Type: TC
Location: 27011 - 27865 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65879_31
Type: STP
Location: 27894 - 29162 (-)
Type: STP
Location: 27894 - 29162 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65879_32
Type: TF
Location: 29244 - 30803 (-)
Type: TF
Location: 29244 - 30803 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65879_33
Type: TC
Location: 30793 - 32562 (-)
Type: TC
Location: 30793 - 32562 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65879_34
Type: TF
Location: 32546 - 33415 (-)
Type: TF
Location: 32546 - 33415 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65879_35
Type: pfam
Location: 33589 - 34650 (+)
Type: pfam
Location: 33589 - 34650 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65879_36
Type: CAZyme
Location: 34707 - 35726 (-)
Type: CAZyme
Location: 34707 - 35726 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900540785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.