Cluster: CokerMO_2019_SRR8692231_bin.5_CGC44
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.5_k141_65510 | CokerMO_2019_SRR8692231_bin.5_k141_65510_29 | 39942 | 41468 | + | 3.A.1.2.20 |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_65510 | CokerMO_2019_SRR8692231_bin.5_k141_65510_30 | 41458 | 42456 | + | 3.A.1.2.1 |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_65510 | CokerMO_2019_SRR8692231_bin.5_k141_65510_31 | 42458 | 43429 | + | 3.A.1.2.8 |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_65510 | CokerMO_2019_SRR8692231_bin.5_k141_65510_32 | 43446 | 44516 | + | 3.A.1.2.9 |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_65510 | CokerMO_2019_SRR8692231_bin.5_k141_65510_33 | 44594 | 46351 | + | 8.A.59.2.1 |
| TF | CokerMO_2019_SRR8692231_bin.5_k141_65510 | CokerMO_2019_SRR8692231_bin.5_k141_65510_34 | 46352 | 47128 | + | HTH_AraC | HTH_AraC |
| pfam | CokerMO_2019_SRR8692231_bin.5_k141_65510 | CokerMO_2019_SRR8692231_bin.5_k141_65510_35 | 47193 | 48044 | + | Shikimate_DH | F420_oxidored | Shikimate_dh_N | SDH_C |
| CAZyme | CokerMO_2019_SRR8692231_bin.5_k141_65510 | CokerMO_2019_SRR8692231_bin.5_k141_65510_36 | 48079 | 49965 | + | GH129 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692231_bin.5_k141_65510 | CokerMO_2019_SRR8692231_bin.5_k141_65510_37 | 50341 | 50709 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | CokerMO_2019_SRR8692231_bin.5_k141_65510 | CokerMO_2019_SRR8692231_bin.5_k141_65510_38 | 50902 | 52755 | + | AAA_15 | AAA_15 | AAA_21 |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_65510 | CokerMO_2019_SRR8692231_bin.5_k141_65510_39 | 53010 | 53612 | - | 2.A.124.1.3 |
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65510_29
Type: TC
Location: 39942 - 41468 (+)
Type: TC
Location: 39942 - 41468 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65510_30
Type: TC
Location: 41458 - 42456 (+)
Type: TC
Location: 41458 - 42456 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65510_31
Type: TC
Location: 42458 - 43429 (+)
Type: TC
Location: 42458 - 43429 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65510_32
Type: TC
Location: 43446 - 44516 (+)
Type: TC
Location: 43446 - 44516 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65510_33
Type: TC
Location: 44594 - 46351 (+)
Type: TC
Location: 44594 - 46351 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65510_34
Type: TF
Location: 46352 - 47128 (+)
Type: TF
Location: 46352 - 47128 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65510_35
Type: pfam
Location: 47193 - 48044 (+)
Type: pfam
Location: 47193 - 48044 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65510_36
Type: CAZyme
Location: 48079 - 49965 (+)
Type: CAZyme
Location: 48079 - 49965 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65510_37
Type:
Location: 50341 - 50709 (+)
Type:
Location: 50341 - 50709 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65510_38
Type: pfam
Location: 50902 - 52755 (+)
Type: pfam
Location: 50902 - 52755 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_65510_39
Type: TC
Location: 53010 - 53612 (-)
Type: TC
Location: 53010 - 53612 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900540785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.