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Cluster: CokerMO_2019_SRR8692231_bin.5_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692231_bin.5_k141_52302 CokerMO_2019_SRR8692231_bin.5_k141_52302_20 15300 16685 - 2.A.40.2.1
peptidase CokerMO_2019_SRR8692231_bin.5_k141_52302 CokerMO_2019_SRR8692231_bin.5_k141_52302_21 16834 18585 - S08.039
CAZyme CokerMO_2019_SRR8692231_bin.5_k141_52302 CokerMO_2019_SRR8692231_bin.5_k141_52302_22 18656 20572 - GH20
TC CokerMO_2019_SRR8692231_bin.5_k141_52302 CokerMO_2019_SRR8692231_bin.5_k141_52302_23 21303 21968 + 3.A.1.125.3
TF CokerMO_2019_SRR8692231_bin.5_k141_52302 CokerMO_2019_SRR8692231_bin.5_k141_52302_24 21990 22676 + Trans_reg_C
STP CokerMO_2019_SRR8692231_bin.5_k141_52302 CokerMO_2019_SRR8692231_bin.5_k141_52302_25 22698 23597 + HATPase_c
TC CokerMO_2019_SRR8692231_bin.5_k141_52302 CokerMO_2019_SRR8692231_bin.5_k141_52302_26 23600 24271 - 3.A.1.134.9
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_52302_20
Type: TC
Location: 15300 - 16685 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_52302_21
Type: peptidase
Location: 16834 - 18585 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_52302_22
Type: CAZyme
Location: 18656 - 20572 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_52302_23
Type: TC
Location: 21303 - 21968 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_52302_24
Type: TF
Location: 21990 - 22676 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_52302_25
Type: STP
Location: 22698 - 23597 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_52302_26
Type: TC
Location: 23600 - 24271 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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