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Cluster: CokerMO_2019_SRR8692231_bin.5_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme CokerMO_2019_SRR8692231_bin.5_k141_50382 CokerMO_2019_SRR8692231_bin.5_k141_50382_24 26510 27460 - GH43_26
CAZyme CokerMO_2019_SRR8692231_bin.5_k141_50382 CokerMO_2019_SRR8692231_bin.5_k141_50382_25 27472 28974 - GH51_1
TF CokerMO_2019_SRR8692231_bin.5_k141_50382 CokerMO_2019_SRR8692231_bin.5_k141_50382_26 28985 30004 - LacI
TC CokerMO_2019_SRR8692231_bin.5_k141_50382 CokerMO_2019_SRR8692231_bin.5_k141_50382_27 30046 30876 - 3.A.1.1.36
TC CokerMO_2019_SRR8692231_bin.5_k141_50382 CokerMO_2019_SRR8692231_bin.5_k141_50382_28 30873 31769 - 3.A.1.1.20
TC CokerMO_2019_SRR8692231_bin.5_k141_50382 CokerMO_2019_SRR8692231_bin.5_k141_50382_29 31833 33089 - 3.A.1.1.3
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_50382_24
Type: CAZyme
Location: 26510 - 27460 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_50382_25
Type: CAZyme
Location: 27472 - 28974 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_50382_26
Type: TF
Location: 28985 - 30004 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_50382_27
Type: TC
Location: 30046 - 30876 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_50382_28
Type: TC
Location: 30873 - 31769 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_50382_29
Type: TC
Location: 31833 - 33089 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
CokerMO_2019_SRR8692231_bin.5_k141_50382_24 vegan > omnivore 2.28673 0.00132
CokerMO_2019_SRR8692231_bin.5_k141_50382_24 vegetarian > omnivore 1.10078 0.04699

🧭 Explore Read Mapping of CGC

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