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Cluster: CokerMO_2019_SRR8692231_bin.5_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme CokerMO_2019_SRR8692231_bin.5_k141_34213 CokerMO_2019_SRR8692231_bin.5_k141_34213_261 286295 287467 + GH5_44
TC CokerMO_2019_SRR8692231_bin.5_k141_34213 CokerMO_2019_SRR8692231_bin.5_k141_34213_262 287497 288885 + 2.A.2.3.3
CAZyme CokerMO_2019_SRR8692231_bin.5_k141_34213 CokerMO_2019_SRR8692231_bin.5_k141_34213_263 288901 290907 + GH42
CAZyme CokerMO_2019_SRR8692231_bin.5_k141_34213 CokerMO_2019_SRR8692231_bin.5_k141_34213_264 290904 292241 + GH30_1
CAZyme CokerMO_2019_SRR8692231_bin.5_k141_34213 CokerMO_2019_SRR8692231_bin.5_k141_34213_265 292257 293903 + CBM91 | GH43_11
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_261
Type: CAZyme
Location: 286295 - 287467 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_262
Type: TC
Location: 287497 - 288885 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_263
Type: CAZyme
Location: 288901 - 290907 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_264
Type: CAZyme
Location: 290904 - 292241 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_265
Type: CAZyme
Location: 292257 - 293903 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
CokerMO_2019_SRR8692231_bin.5_k141_34213_261 vegetarian > omnivore 1.49448 0.04699
CokerMO_2019_SRR8692231_bin.5_k141_34213_265 vegan > omnivore 1.36628 0.00132
CokerMO_2019_SRR8692231_bin.5_k141_34213_265 vegetarian > omnivore 2.28654 0.03622

🧭 Explore Read Mapping of CGC

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