Cluster: CokerMO_2019_SRR8692231_bin.5_CGC26
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.5
- CGC Family ID: CGCFAM_05246
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.5_k141_34213 | CokerMO_2019_SRR8692231_bin.5_k141_34213_214 | 221456 | 222895 | - | 2.A.38.1.1 |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_34213 | CokerMO_2019_SRR8692231_bin.5_k141_34213_215 | 222906 | 224264 | - | 2.A.38.1.1 |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_34213 | CokerMO_2019_SRR8692231_bin.5_k141_34213_216 | 224475 | 226271 | + | 8.A.59.2.1 |
| TF | CokerMO_2019_SRR8692231_bin.5_k141_34213 | CokerMO_2019_SRR8692231_bin.5_k141_34213_217 | 226274 | 227758 | + | HTH_AraC |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_34213 | CokerMO_2019_SRR8692231_bin.5_k141_34213_218 | 227787 | 228959 | + | 3.A.1.1.44 |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_34213 | CokerMO_2019_SRR8692231_bin.5_k141_34213_219 | 229085 | 230314 | + | 3.A.1.1.40 |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_34213 | CokerMO_2019_SRR8692231_bin.5_k141_34213_220 | 230437 | 231312 | + | 3.A.1.1.19 |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_34213 | CokerMO_2019_SRR8692231_bin.5_k141_34213_221 | 231313 | 232149 | + | 3.A.1.1.41 |
| CAZyme | CokerMO_2019_SRR8692231_bin.5_k141_34213 | CokerMO_2019_SRR8692231_bin.5_k141_34213_222 | 232163 | 234100 | + | GH127 |
| TF | CokerMO_2019_SRR8692231_bin.5_k141_34213 | CokerMO_2019_SRR8692231_bin.5_k141_34213_223 | 234320 | 235225 | - | HTH_AraC | HTH_AraC |
| TC | CokerMO_2019_SRR8692231_bin.5_k141_34213 | CokerMO_2019_SRR8692231_bin.5_k141_34213_224 | 235310 | 236656 | + | 2.A.66.1.33 |
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_214
Type: TC
Location: 221456 - 222895 (-)
Type: TC
Location: 221456 - 222895 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_215
Type: TC
Location: 222906 - 224264 (-)
Type: TC
Location: 222906 - 224264 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_216
Type: TC
Location: 224475 - 226271 (+)
Type: TC
Location: 224475 - 226271 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_217
Type: TF
Location: 226274 - 227758 (+)
Type: TF
Location: 226274 - 227758 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_218
Type: TC
Location: 227787 - 228959 (+)
Type: TC
Location: 227787 - 228959 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_219
Type: TC
Location: 229085 - 230314 (+)
Type: TC
Location: 229085 - 230314 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_220
Type: TC
Location: 230437 - 231312 (+)
Type: TC
Location: 230437 - 231312 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_221
Type: TC
Location: 231313 - 232149 (+)
Type: TC
Location: 231313 - 232149 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_222
Type: CAZyme
Location: 232163 - 234100 (+)
Type: CAZyme
Location: 232163 - 234100 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_223
Type: TF
Location: 234320 - 235225 (-)
Type: TF
Location: 234320 - 235225 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_34213_224
Type: TC
Location: 235310 - 236656 (+)
Type: TC
Location: 235310 - 236656 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900540785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.