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Cluster: CokerMO_2019_SRR8692231_bin.5_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692231_bin.5_k141_20240 CokerMO_2019_SRR8692231_bin.5_k141_20240_18 15846 17204 - 2.A.66.1.28
CAZyme CokerMO_2019_SRR8692231_bin.5_k141_20240 CokerMO_2019_SRR8692231_bin.5_k141_20240_19 17263 18741 - GH32
NULL(UNKNOWN) CokerMO_2019_SRR8692231_bin.5_k141_20240 CokerMO_2019_SRR8692231_bin.5_k141_20240_20 18754 20439 - NULL(UNKNOWN)
[View Structural Homologs]
TC CokerMO_2019_SRR8692231_bin.5_k141_20240 CokerMO_2019_SRR8692231_bin.5_k141_20240_21 20459 21355 - 3.A.1.1.29
TC CokerMO_2019_SRR8692231_bin.5_k141_20240 CokerMO_2019_SRR8692231_bin.5_k141_20240_22 21369 22304 - 3.A.1.1.10
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_20240_18
Type: TC
Location: 15846 - 17204 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_20240_19
Type: CAZyme
Location: 17263 - 18741 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_20240_20
Type:
Location: 18754 - 20439 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_20240_21
Type: TC
Location: 20459 - 21355 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.5_k141_20240_22
Type: TC
Location: 21369 - 22304 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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