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Cluster: CokerMO_2019_SRR8692231_bin.30_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme CokerMO_2019_SRR8692231_bin.30_k141_39547 CokerMO_2019_SRR8692231_bin.30_k141_39547_354 389331 390752 - GT5
pfam CokerMO_2019_SRR8692231_bin.30_k141_39547 CokerMO_2019_SRR8692231_bin.30_k141_39547_355 390783 391901 - NTP_transferase | Hexapep_GlmU
pfam CokerMO_2019_SRR8692231_bin.30_k141_39547 CokerMO_2019_SRR8692231_bin.30_k141_39547_356 391903 393120 - NTP_transferase | Hexapep_GlmU
CAZyme CokerMO_2019_SRR8692231_bin.30_k141_39547 CokerMO_2019_SRR8692231_bin.30_k141_39547_357 393158 395158 - GH13_9
TC CokerMO_2019_SRR8692231_bin.30_k141_39547 CokerMO_2019_SRR8692231_bin.30_k141_39547_358 395480 396853 + 2.A.25.1.9
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_39547_354
Type: CAZyme
Location: 389331 - 390752 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_39547_355
Type: pfam
Location: 390783 - 391901 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_39547_356
Type: pfam
Location: 391903 - 393120 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_39547_357
Type: CAZyme
Location: 393158 - 395158 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_39547_358
Type: TC
Location: 395480 - 396853 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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