Cluster: CokerMO_2019_SRR8692231_bin.30_CGC6
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.30
- CGC Family ID: CGCFAM_04924
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_152 | 156999 | 158120 | + | 2.A.45.2.6 |
| pfam | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_153 | 158150 | 159205 | - | Cons_hypoth698 |
| TF | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_154 | 159319 | 160227 | + | HTH_1 |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_155 | 160371 | 161714 | + | 2.A.26.1.1 |
| STP | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_156 | 162106 | 163017 | + | Pyr_redox_2 |
| STP | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_157 | 163503 | 164522 | + | Peripla_BP_2 |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_158 | 164524 | 165603 | + | 3.A.1.14.5 |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_159 | 165600 | 166370 | + | 3.A.1.14.1 |
| pfam | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_160 | 166367 | 166705 | + | CGGC |
| pfam | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_161 | 166809 | 167810 | + | SPL |
| CAZyme | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_162 | 167885 | 169357 | + | CE4 |
| STP | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_163 | 169368 | 169556 | + | Fer4 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_164 | 169701 | 169814 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_165 | 170011 | 171243 | - | 2.A.49.9.3 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_166 | 171334 | 171480 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_167 | 172043 | 173326 | - | GH18 |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_26337 | CokerMO_2019_SRR8692231_bin.30_k141_26337_168 | 173566 | 174321 | + | 3.A.1.20.2 |
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_152
Type: TC
Location: 156999 - 158120 (+)
Type: TC
Location: 156999 - 158120 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_153
Type: pfam
Location: 158150 - 159205 (-)
Type: pfam
Location: 158150 - 159205 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_154
Type: TF
Location: 159319 - 160227 (+)
Type: TF
Location: 159319 - 160227 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_155
Type: TC
Location: 160371 - 161714 (+)
Type: TC
Location: 160371 - 161714 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_156
Type: STP
Location: 162106 - 163017 (+)
Type: STP
Location: 162106 - 163017 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_157
Type: STP
Location: 163503 - 164522 (+)
Type: STP
Location: 163503 - 164522 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_158
Type: TC
Location: 164524 - 165603 (+)
Type: TC
Location: 164524 - 165603 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_159
Type: TC
Location: 165600 - 166370 (+)
Type: TC
Location: 165600 - 166370 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_160
Type: pfam
Location: 166367 - 166705 (+)
Type: pfam
Location: 166367 - 166705 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_161
Type: pfam
Location: 166809 - 167810 (+)
Type: pfam
Location: 166809 - 167810 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_162
Type: CAZyme
Location: 167885 - 169357 (+)
Type: CAZyme
Location: 167885 - 169357 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_163
Type: STP
Location: 169368 - 169556 (+)
Type: STP
Location: 169368 - 169556 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_164
Type:
Location: 169701 - 169814 (+)
Type:
Location: 169701 - 169814 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_165
Type: TC
Location: 170011 - 171243 (-)
Type: TC
Location: 170011 - 171243 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_166
Type:
Location: 171334 - 171480 (-)
Type:
Location: 171334 - 171480 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_167
Type: CAZyme
Location: 172043 - 173326 (-)
Type: CAZyme
Location: 172043 - 173326 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_26337_168
Type: TC
Location: 173566 - 174321 (+)
Type: TC
Location: 173566 - 174321 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1071
Species
UMGS1071 sp900548305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.