Cluster: CokerMO_2019_SRR8692231_bin.30_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.30
- CGC Family ID: CGCFAM_00664
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.30_k141_63227 | CokerMO_2019_SRR8692231_bin.30_k141_63227_20 | 17768 | 18451 | + | 1.C.113.1.1 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692231_bin.30_k141_63227 | CokerMO_2019_SRR8692231_bin.30_k141_63227_21 | 19194 | 19532 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | CokerMO_2019_SRR8692231_bin.30_k141_63227 | CokerMO_2019_SRR8692231_bin.30_k141_63227_22 | 19555 | 20328 | - | adh_short | adh_short_C2 |
| CAZyme | CokerMO_2019_SRR8692231_bin.30_k141_63227 | CokerMO_2019_SRR8692231_bin.30_k141_63227_23 | 20651 | 21532 | + | CE4 |
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_63227_20
Type: TC
Location: 17768 - 18451 (+)
Type: TC
Location: 17768 - 18451 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_63227_21
Type:
Location: 19194 - 19532 (-)
Type:
Location: 19194 - 19532 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_63227_22
Type: pfam
Location: 19555 - 20328 (-)
Type: pfam
Location: 19555 - 20328 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_63227_23
Type: CAZyme
Location: 20651 - 21532 (+)
Type: CAZyme
Location: 20651 - 21532 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1071
Species
UMGS1071 sp900548305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.