Cluster: CokerMO_2019_SRR8692231_bin.27_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.27
- CGC Family ID: CGCFAM_05858
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692231_bin.27_k141_31775 | CokerMO_2019_SRR8692231_bin.27_k141_31775_2 | 2056 | 4533 | + | GT35 |
| STP | CokerMO_2019_SRR8692231_bin.27_k141_31775 | CokerMO_2019_SRR8692231_bin.27_k141_31775_3 | 4792 | 5541 | + | Peptidase_M23 |
| pfam | CokerMO_2019_SRR8692231_bin.27_k141_31775 | CokerMO_2019_SRR8692231_bin.27_k141_31775_4 | 5802 | 6242 | + | GIY-YIG |
| TC | CokerMO_2019_SRR8692231_bin.27_k141_31775 | CokerMO_2019_SRR8692231_bin.27_k141_31775_5 | 6292 | 6942 | - | 1.C.113.1.2 |
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_31775_2
Type: CAZyme
Location: 2056 - 4533 (+)
Type: CAZyme
Location: 2056 - 4533 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_31775_3
Type: STP
Location: 4792 - 5541 (+)
Type: STP
Location: 4792 - 5541 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_31775_4
Type: pfam
Location: 5802 - 6242 (+)
Type: pfam
Location: 5802 - 6242 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.27_k141_31775_5
Type: TC
Location: 6292 - 6942 (-)
Type: TC
Location: 6292 - 6942 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
JAGZHZ01
Species
JAGZHZ01 sp018366495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.